Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase subunit dhak | FGC38_RS06950 | Not Available | Negative | 1384931 - 1386001 | 38217.4 |
| dihydroxyacetone kinase operon transcriptional regulator dhar | FGC38_RS06955 | Not Available | Positive | 1386229 - 1388148 | 70565.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | FGC38_RS06960 | Not Available | Negative | 1388248 - 1391115 | 99690.6 |
| redox-regulated atpase ychf | FGC38_RS06965 | Not Available | Negative | 1391884 - 1392975 | 39669.6 |
| aminoacyl-trna hydrolase | FGC38_RS06970 | Not Available | Negative | 1393092 - 1393676 | 21083.5 |
| stress-induced protein ychh | FGC38_RS06975 | Not Available | Positive | 1393954 - 1394232 | 10486.9 |
| c4-dicarboxylic acid transporter daua | FGC38_RS06980 | Not Available | Negative | 1394287 - 1395966 | 59432.8 |
| ribose-phosphate diphosphokinase | FGC38_RS06985 | Not Available | Negative | 1396091 - 1397038 | 34220.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | FGC38_RS06990 | Not Available | Negative | 1397189 - 1398040 | 30927.1 |
| lipoprotein insertase outer membrane protein lolb | FGC38_RS06995 | Not Available | Negative | 1398040 - 1398663 | 23552.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





