Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpm domain-containing protein | FGC38_RS06525 | Not Available | Negative | 1315644 - 1316432 | 28866.5 |
| duf3592 domain-containing protein | FGC38_RS06530 | Not Available | Negative | 1316429 - 1316890 | 17416.9 |
| spermidine/putrescine abc transporter substrate-binding protein potd | FGC38_RS06535 | Not Available | Negative | 1316948 - 1317994 | 38869.1 |
| spermidine/putrescine abc transporter permease potc | FGC38_RS06540 | Not Available | Negative | 1317991 - 1318785 | 29112.7 |
| spermidine/putrescine abc transporter permease potb | FGC38_RS06545 | Not Available | Negative | 1318782 - 1319639 | 32210.3 |
| spermidine/putrescine abc transporter atp-binding protein pota | FGC38_RS06550 | Not Available | Negative | 1319623 - 1320759 | 43030.8 |
| peptidase t | FGC38_RS06555 | Not Available | Positive | 1321009 - 1322235 | 44926.1 |
| [50s ribosomal protein l16]-arginine 3-hydroxylase | FGC38_RS06560 | Not Available | Negative | 1322284 - 1323405 | 42581.2 |
| two-component system sensor histidine kinase phoq | FGC38_RS06565 | Not Available | Negative | 1323481 - 1324941 | 55302.8 |
| two-component system response regulator phop | FGC38_RS06570 | Not Available | Negative | 1324941 - 1325612 | 25536.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





