Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-protein kinase | FGC38_RS05820 | Not Available | Negative | 1177195 - 1179375 | 81246.5 |
| protein-tyrosine-phosphatase etp | FGC38_RS05825 | Not Available | Negative | 1179395 - 1179841 | 16386.9 |
| polysaccharide export protein | FGC38_RS05830 | Not Available | Negative | 1179829 - 1180968 | 41743.2 |
| yjbh domain-containing protein | FGC38_RS05835 | Not Available | Negative | 1181014 - 1183110 | 78691.3 |
| capsule biosynthesis gfcc family protein | FGC38_RS05840 | Not Available | Negative | 1183110 - 1183856 | 27297.6 |
| lipoprotein gfcb | FGC38_RS05845 | Not Available | Negative | 1183853 - 1184497 | 24268.9 |
| threonine-rich inner membrane protein gfca | FGC38_RS05850 | Not Available | Negative | 1184604 - 1184909 | 9508.04 |
| is1-like element is1d family transposase | FGC38_RS05855 | Not Available | Positive | 1184998 - 1185695 | 26584.4 |
| cold shock-like protein csph | FGC38_RS05860 | Not Available | Negative | 1186128 - 1186340 | 7720.48 |
| cold shock protein cspg | FGC38_RS05865 | Not Available | Positive | 1186626 - 1186838 | 7781.14 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





