Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Integrase | FGC38_RS06620 | Not Available | Negative | 1334844 - 1335971 | 42801.4 |
| excisionase-like protein from lambdoid prophage 14 | FGC38_RS06625 | Not Available | Negative | 1335952 - 1336197 | 9287.34 |
| Hypothetical protein | FGC38_RS06630 | Not Available | Negative | 1336234 - 1336545 | 10963.4 |
| protein ymfi | FGC38_RS06635 | Not Available | Positive | 1336662 - 1337003 | 12883.4 |
| Hypothetical protein | FGC38_RS06640 | Not Available | Negative | 1336941 - 1337249 | 11459.2 |
| Repressor / ci | FGC38_RS06645 | Not Available | Negative | 1337424 - 1338098 | 25096.1 |
| Repressor | FGC38_RS06650 | Not Available | Positive | 1338189 - 1338389 | 7402.87 |
| Transcriptional regulator | FGC38_RS06655 | Not Available | Positive | 1338433 - 1338990 | 20212.8 |
| Putative antirepressor | FGC38_RS06660 | Not Available | Positive | 1339166 - 1339345 | 7500.92 |
| Replication protein | FGC38_RS23680 | Not Available | Positive | 1339386 - 1339550 | 5982.26 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





