Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein potf | FGC38_RS05175 | Not Available | Positive | 1028949 - 1030061 | 40841.7 |
| putrescine abc transporter atp-binding subunit potg | FGC38_RS05180 | Not Available | Positive | 1030156 - 1031289 | 41933.3 |
| putrescine abc transporter permease poth | FGC38_RS05185 | Not Available | Positive | 1031299 - 1032252 | 35491.6 |
| putrescine abc transporter permease poti | FGC38_RS05190 | Not Available | Positive | 1032249 - 1033094 | 30542.4 |
| ybjo family protein | FGC38_RS05195 | Not Available | Positive | 1033154 - 1033642 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | FGC38_RS05200 | Not Available | Positive | 1033683 - 1034810 | 41958.1 |
| hypothetical protein | FGC38_RS23795 | Not Available | Positive | 1034861 - 1034959 | 3301.04 |
| arginine abc transporter substrate-binding protein artj | FGC38_RS05205 | Not Available | Negative | 1035009 - 1035740 | 26830.9 |
| arginine abc transporter permease artm | FGC38_RS05210 | Not Available | Negative | 1036031 - 1036699 | 24915.3 |
| arginine abc transporter permease artq | FGC38_RS05215 | Not Available | Negative | 1036699 - 1037415 | 26218.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





