Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase | FGC38_RS05125 | Not Available | Negative | 1020482 - 1021297 | 30197.9 |
| mfs transporter | FGC38_RS05130 | Not Available | Negative | 1021297 - 1022505 | 41855.1 |
| dna-binding transcriptional regulator rcda | FGC38_RS05135 | Not Available | Positive | 1022589 - 1023125 | 20308.6 |
| aspartate:alanine antiporter | FGC38_RS05140 | Not Available | Negative | 1023300 - 1024985 | 60355.1 |
| hypothetical protein | FGC38_RS05145 | Not Available | Positive | 1025255 - 1025631 | 14155.8 |
| glutaredoxin 1 | FGC38_RS05150 | Not Available | Negative | 1025661 - 1025918 | 9685.35 |
| duf1418 family protein | FGC38_RS05155 | Not Available | Positive | 1026078 - 1026365 | 10521.4 |
| nitroreductase nfsa | FGC38_RS05160 | Not Available | Positive | 1026349 - 1027071 | 26802.2 |
| 30s ribosomal protein s6--l-glutamate ligase | FGC38_RS05165 | Not Available | Positive | 1027132 - 1028034 | 32438.5 |
| ybjn domain-containing protein | FGC38_RS05170 | Not Available | Positive | 1028122 - 1028598 | 17667.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





