Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catecholate siderophore receptor fiu | FGC38_RS04925 | Not Available | Negative | 974415 - 976697 | 81964.5 |
| duf1471 family periplasmic protein mcba | FGC38_RS04930 | Not Available | Negative | 976962 - 977222 | 8896.65 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | FGC38_RS04935 | Not Available | Positive | 977498 - 978424 | 34227.8 |
| mechanosensitive channel protein | FGC38_RS04940 | Not Available | Negative | 978421 - 980646 | 81908.5 |
| glutamine abc transporter atp-binding protein glnq | FGC38_RS04945 | Not Available | Negative | 980907 - 981629 | 26732.6 |
| glutamine abc transporter permease glnp | FGC38_RS04950 | Not Available | Negative | 981626 - 982285 | 24365.8 |
| glutamine abc transporter substrate-binding protein glnh | FGC38_RS04955 | Not Available | Negative | 982424 - 983170 | 27191.5 |
| dna starvation/stationary phase protection protein dps | FGC38_RS04960 | Not Available | Negative | 983574 - 984077 | 18696.3 |
| threonine/homoserine exporter rhta | FGC38_RS04965 | Not Available | Negative | 984376 - 985263 | 31170.4 |
| protein ylim | FGC38_RS04970 | Not Available | Positive | 985498 - 985563 | 2716.34 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





