Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator cecr | FGC38_RS04880 | Not Available | Negative | 965138 - 965809 | 25018.1 |
| atp-dependent rna helicase rhle | FGC38_RS04885 | Not Available | Positive | 966038 - 967402 | 49992.4 |
| n-glycosidase ybia | FGC38_RS04890 | Not Available | Negative | 967634 - 968116 | 18670.3 |
| atp-dependent dna helicase ding | FGC38_RS04895 | Not Available | Positive | 968236 - 970386 | 81444.9 |
| dna-binding protein ybib | FGC38_RS04900 | Not Available | Positive | 970414 - 971376 | 35050.7 |
| hydroxycarboxylate dehydrogenase hcxb | FGC38_RS04905 | Not Available | Positive | 971517 - 972602 | 38899.3 |
| protein ybie | FGC38_RS23485 | Not Available | Positive | 972669 - 972728 | 2006.37 |
| duf1471 family protein ybij | FGC38_RS04910 | Not Available | Negative | 972831 - 973091 | 8568.2 |
| c4-type zinc finger protein ybii | FGC38_RS04915 | Not Available | Negative | 973356 - 973622 | 9756.33 |
| pkhd-type hydroxylase ybix | FGC38_RS04920 | Not Available | Negative | 973696 - 974373 | 25530.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





