Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 867731 - 867806 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 867810 - 867885 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 868032 - 868107 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 868240 - 868315 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 868346 - 868471 | Not Available |
| quinolinate synthase nada | FGC38_RS04300 | Not Available | Positive | 868748 - 869791 | 38242.9 |
| nicotinamide riboside transporter pnuc | FGC38_RS04305 | Not Available | Positive | 869829 - 870548 | 26997.8 |
| cdf family zinc transporter zitb | FGC38_RS04310 | Not Available | Negative | 870545 - 871486 | 34680.5 |
| ybgs-like family protein | FGC38_RS04315 | Not Available | Negative | 871600 - 871980 | 12872.7 |
| 3-deoxy-7-phosphoheptulonate synthase arog | FGC38_RS04320 | Not Available | Positive | 872296 - 873348 | 38011.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





