Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybga family protein | FGC38_RS04075 | Not Available | Positive | 825664 - 826173 | 20212.4 |
| deoxyribodipyrimidine photo-lyase | FGC38_RS04080 | Not Available | Positive | 826170 - 827588 | 53669.8 |
| dipeptide permease dtpd | FGC38_RS04085 | Not Available | Negative | 827738 - 829219 | 54162.1 |
| radiation resistance protein ybgi | FGC38_RS04090 | Not Available | Positive | 829490 - 830233 | 26894.0 |
| 5-oxoprolinase subunit pxpb | FGC38_RS04095 | Not Available | Positive | 830256 - 830912 | 23948.0 |
| 5-oxoprolinase subunit pxpc | FGC38_RS04100 | Not Available | Positive | 830906 - 831838 | 34388.4 |
| 5-oxoprolinase subunit pxpa | FGC38_RS04105 | Not Available | Positive | 831828 - 832562 | 25801.9 |
| endonuclease viii | FGC38_RS04110 | Not Available | Positive | 832598 - 833389 | 29846.8 |
| abrb family transcriptional regulator | FGC38_RS04115 | Not Available | Negative | 833386 - 834432 | 36886.1 |
| fimbrial protein | FGC38_RS04120 | Not Available | Negative | 834584 - 835645 | 39540.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





