Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | FGC38_RS03975 | Not Available | Positive | 802075 - 802569 | 18283.0 |
| hypothetical protein | FGC38_RS03980 | Not Available | Negative | 802610 - 803260 | 24493.8 |
| hypothetical protein | FGC38_RS03985 | Not Available | Negative | 803384 - 803533 | 5774.04 |
| putrescine-ornithine antiporter | FGC38_RS03990 | Not Available | Negative | 803609 - 804928 | 46497.6 |
| ornithine decarboxylase spef | FGC38_RS03995 | Not Available | Negative | 804925 - 807123 | 82420.3 |
| leader peptide spefl | FGC38_RS23480 | Not Available | Negative | 807381 - 807485 | 4249.08 |
| two-component system response regulator kdpe | FGC38_RS04005 | Not Available | Negative | 807719 - 808396 | 25363.7 |
| two-component system sensor histidine kinase kdpd | FGC38_RS04010 | Not Available | Negative | 808393 - 811077 | 98724.2 |
| k(+)-transporting atpase subunit c | FGC38_RS04015 | Not Available | Negative | 811070 - 811642 | 20268.3 |
| potassium-transporting atpase subunit kdpb | FGC38_RS04020 | Not Available | Negative | 811651 - 813699 | 72203.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





