Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit beta | DNQ41_RS24585 | Not Available | Negative | 4801191 - 4802291 | 40589.1 |
| chromosomal replication initiator protein dnaa | DNQ41_RS24590 | Not Available | Negative | 4802296 - 4803699 | 52553.7 |
| protein ysdd | DNQ41_RS27740 | Not Available | Positive | 4803996 - 4804076 | 3111.7 |
| 50s ribosomal protein l34 | DNQ41_RS24600 | Not Available | Positive | 4804306 - 4804446 | 5380.74 |
| ribonuclease p protein component | DNQ41_RS24605 | Not Available | Positive | 4804463 - 4804822 | 13790.0 |
| membrane protein insertion efficiency factor yidd | DNQ41_RS24610 | Not Available | Positive | 4804786 - 4805043 | 9381.61 |
| membrane protein insertase yidc | DNQ41_RS24615 | Not Available | Positive | 4805046 - 4806692 | 61529.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DNQ41_RS24620 | Not Available | Positive | 4806798 - 4808162 | 49233.8 |
| tryptophanase leader peptide | DNQ41_RS24625 | Not Available | Positive | 4808405 - 4808479 | 2894.56 |
| tryptophanase | DNQ41_RS24630 | Not Available | Positive | 4808700 - 4810115 | 52776.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





