Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yiaa | DNQ41_RS23780 | Not Available | Negative | 4644385 - 4644822 | 16123.6 |
| inner membrane protein yiab | DNQ41_RS23785 | Not Available | Negative | 4644868 - 4645209 | 12555.9 |
| carbohydrate-specific porin bglh | DNQ41_RS23790 | Not Available | Negative | 4645378 - 4646831 | 53289.9 |
| xylose isomerase | DNQ41_RS23795 | Not Available | Negative | 4646903 - 4648225 | 49744.7 |
| d-xylose abc transporter substrate-binding protein | DNQ41_RS23800 | Not Available | Positive | 4648591 - 4649583 | 35736.1 |
| d-xylose abc transporter atp-binding protein | DNQ41_RS23805 | Not Available | Positive | 4649661 - 4651202 | 56459.9 |
| xylose abc transporter permease xylh | DNQ41_RS23810 | Not Available | Positive | 4651180 - 4652361 | 41033.5 |
| d-xylose utilization transcriptional activator xylr | DNQ41_RS23815 | Not Available | Positive | 4652439 - 4653617 | 44871.7 |
| protein bax | DNQ41_RS23820 | Not Available | Negative | 4653813 - 4654637 | 30869.3 |
| alpha-amylase | DNQ41_RS23825 | Not Available | Positive | 4654957 - 4656987 | 75715.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





