Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexuronate transporter exut | DNQ41_RS21225 | Not Available | Positive | 4158909 - 4160207 | 46895.0 |
| transcriptional regulator exur | DNQ41_RS21230 | Not Available | Positive | 4160337 - 4161113 | 29837.3 |
| protein yqim | DNQ41_RS28105 | Not Available | Positive | 4161353 - 4161436 | 3305.08 |
| deda family general envelope maintenance protein yqja | DNQ41_RS21235 | Not Available | Positive | 4161458 - 4162120 | 24587.0 |
| envz/ompr regulon moderator mzra | DNQ41_RS21240 | Not Available | Positive | 4162124 - 4162507 | 14173.0 |
| duf1090 family protein yqjc | DNQ41_RS21245 | Not Available | Positive | 4162654 - 4163022 | 13906.4 |
| duf883 family protein | DNQ41_RS21250 | Not Available | Positive | 4163060 - 4163365 | 11052.1 |
| phage holin family protein | DNQ41_RS21255 | Not Available | Positive | 4163368 - 4163772 | 15148.0 |
| yqjk-like family protein | DNQ41_RS21260 | Not Available | Positive | 4163762 - 4164061 | 11811.4 |
| doxx family protein | DNQ41_RS21265 | Not Available | Positive | 4164247 - 4164639 | 14102.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





