Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase bara | DNQ41_RS18990 | Not Available | Positive | 3730063 - 3732819 | 102460.0 |
| glucarate dehydratase | DNQ41_RS18995 | Not Available | Negative | 3733051 - 3734391 | 49099.9 |
| enolase c-terminal domain-like protein | DNQ41_RS19000 | Not Available | Negative | 3734412 - 3735752 | 48852.3 |
| galactarate/glucarate/glycerate transporter gudp | DNQ41_RS19005 | Not Available | Negative | 3735754 - 3737106 | 49145.0 |
| flavodoxin | DNQ41_RS19010 | Not Available | Negative | 3737541 - 3737990 | 16275.1 |
| trna pseudouridine(65) synthase truc | DNQ41_RS19015 | Not Available | Negative | 3738008 - 3738790 | 29667.5 |
| yqcc family protein | DNQ41_RS19020 | Not Available | Negative | 3738790 - 3739119 | 12787.2 |
| secy-interacting protein | DNQ41_RS19025 | Not Available | Negative | 3739741 - 3740286 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DNQ41_RS19030 | Not Available | Positive | 3740354 - 3741202 | 32589.3 |
| nucleotide 5'-monophosphate nucleosidase ppnn | DNQ41_RS19035 | Not Available | Positive | 3741314 - 3742678 | 50975.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





