Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpoe leader peptide rsed | DNQ41_RS27690 | Not Available | Negative | 3547166 - 3547321 | 6229.83 |
| l-aspartate oxidase | DNQ41_RS18060 | Not Available | Positive | 3547577 - 3549199 | 60340.9 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | DNQ41_RS18065 | Not Available | Negative | 3549184 - 3549921 | 27271.4 |
| atp-dependent rna helicase srmb | DNQ41_RS18070 | Not Available | Positive | 3550053 - 3551387 | 49901.0 |
| lysr family transcriptional regulator | DNQ41_RS18075 | Not Available | Negative | 3551596 - 3552477 | 33245.2 |
| cysteine/o-acetylserine transporter | DNQ41_RS18080 | Not Available | Positive | 3552580 - 3553167 | 21249.5 |
| autonomous glycyl radical cofactor grca | DNQ41_RS18085 | Not Available | Negative | 3553223 - 3553606 | 14285.0 |
| uracil-dna glycosylase | DNQ41_RS18090 | Not Available | Positive | 3553911 - 3554600 | 25694.7 |
| trna/rrna methyltransferase | DNQ41_RS18095 | Not Available | Negative | 3554648 - 3555685 | 37786.5 |
| thioredoxin trxc | DNQ41_RS18105 | Not Available | Positive | 3555892 - 3556311 | 15555.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





