Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit h | DNQ41_RS17580 | Not Available | Positive | 3447415 - 3447960 | 20160.4 |
| hydrogenase 4 catalytic subunit hyfi | DNQ41_RS17585 | Not Available | Positive | 3447957 - 3448715 | 28102.9 |
| hydrogenase 4 assembly chaperone hyfj | DNQ41_RS17590 | Not Available | Positive | 3448708 - 3449121 | 15577.8 |
| dna-binding transcriptional regulator hyfr | DNQ41_RS17595 | Not Available | Positive | 3449151 - 3451163 | 75309.7 |
| formate transporter focb | DNQ41_RS17600 | Not Available | Positive | 3451185 - 3452033 | 30566.4 |
| ai-2e family transporter | DNQ41_RS17610 | Not Available | Negative | 3452071 - 3453132 | 39196.9 |
| beta-barrel assembly-enhancing protease | DNQ41_RS17615 | Not Available | Positive | 3453345 - 3454808 | 53911.1 |
| arsenate reductase (glutaredoxin) | DNQ41_RS17620 | Not Available | Positive | 3454829 - 3455188 | 13399.4 |
| dnaa inactivator hda | DNQ41_RS17625 | Not Available | Negative | 3455326 - 3456027 | 26634.2 |
| uracil permease | DNQ41_RS17630 | Not Available | Negative | 3456122 - 3457411 | 45063.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





