Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease acrd | DNQ41_RS17480 | Not Available | Positive | 3424846 - 3427959 | 113054.0 |
| protein ypfm | DNQ41_RS17485 | Not Available | Negative | 3428058 - 3428117 | 2408.02 |
| arsc family reductase | DNQ41_RS17490 | Not Available | Positive | 3428498 - 3428854 | 13601.3 |
| succinyl-diaminopimelate desuccinylase | DNQ41_RS17495 | Not Available | Positive | 3428858 - 3429985 | 41271.4 |
| ypfn family protein | DNQ41_RS17500 | Not Available | Positive | 3430013 - 3430213 | 8071.78 |
| esterase | DNQ41_RS17505 | Not Available | Negative | 3430323 - 3431021 | 24914.5 |
| trna cytosine(34) acetyltransferase tmca | DNQ41_RS17510 | Not Available | Negative | 3431095 - 3433110 | 74896.7 |
| neutral zinc metallopeptidase | DNQ41_RS17515 | Not Available | Negative | 3433125 - 3433988 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DNQ41_RS17520 | Not Available | Negative | 3434156 - 3434869 | 26996.5 |
| outer membrane protein assembly factor bamc | DNQ41_RS17525 | Not Available | Negative | 3435082 - 3436116 | 36844.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





