Escherichia coli str. 51008369SK1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 51008369SK1 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as singles. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments, which is a common characteristic among many E. coli strains. The optimal growth temperature for E. coli str. 51008369SK1 is approximately 37.0°C, aligning with the typical human body temperature and suggesting its adaptation to a host-associated habitat. This strain's habitat is specifically noted as host-associated, which implies a potential relationship with the gastrointestinal tract of mammals, where E. coli is predominantly found. The facultative anaerobic nature of this bacterium allows it to utilize various metabolic pathways depending on the availability of oxygen, contributing to its versatility in diverse environments within the host. The ability of E. coli str. 51008369SK1 to exist in both aerobic and anaerobic conditions may facilitate its survival and colonization in the dynamic microenvironments of the host's intestinal flora. Understanding the traits of this particular strain can provide insights into its potential roles within the microbiome, including nutrient cycling and interactions with other microbial communities, underscoring the complexity of host-associated bacterial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain51008369SK1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 51008369SK1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,

Gene Summary

Adenine Count

9427 bp

Thymine Count

10322 bp

Guanine Count

6411 bp

Cytosine Count

7666 bp

Genome Length

33826 bp

Protein-coding Genes

43 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
o-succinylbenzoate synthaseDNQ41_RS16495Not AvailableNegative3224779 - 322574135478.6
1,4-dihydroxy-2-naphthoyl-coa synthaseDNQ41_RS16500Not AvailableNegative3225741 - 322659831634.9
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseDNQ41_RS16505Not AvailableNegative3226613 - 322737127683.9
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseDNQ41_RS16510Not AvailableNegative3227368 - 322903861326.5
isochorismate synthase menfDNQ41_RS16515Not AvailableNegative3229127 - 323042248797.4
stress response protein elabDNQ41_RS16520Not AvailableNegative3230501 - 323080611306.3
gnat family n-acetyltransferaseDNQ41_RS16525Not AvailableNegative3230861 - 323132217420.7
ribonuclease bnDNQ41_RS16530Not AvailablePositive3231387 - 323230432931.5
deubiquitinase eladDNQ41_RS16535Not AvailablePositive3232492 - 323370346106.7
vwa domain-containing proteinDNQ41_RS16540Not AvailableNegative3233774 - 323550163637.4

Displaying genes 3161 – 3170 of 5078 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total