Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna pseudouridine(516) synthase rsua | DNQ41_RS15745 | Not Available | Negative | 3084425 - 3085120 | 25866.8 |
| dead/deah box helicase | DNQ41_RS15755 | Not Available | Positive | 3085270 - 3087030 | 66546.0 |
| 50s ribosomal protein l25 | DNQ41_RS15760 | Not Available | Positive | 3087155 - 3087439 | 10693.1 |
| nucleoid-associated protein yejk | DNQ41_RS15765 | Not Available | Negative | 3087578 - 3088585 | 37825.6 |
| yejl family protein | DNQ41_RS15770 | Not Available | Positive | 3088767 - 3088994 | 8288.95 |
| lps biosynthesis-modulating metalloenzyme yejm | DNQ41_RS15775 | Not Available | Positive | 3089014 - 3090774 | 67328.9 |
| Trna-pro | Not Available | Not Available | Positive | 3090849 - 3090925 | Not Available |
| carbohydrate-specific porin bglh | DNQ41_RS15785 | Not Available | Positive | 3091167 - 3091414 | 8786.23 |
| nitrate/nitrite response regulator protein narp | DNQ41_RS16130 | Not Available | Positive | 3141141 - 3141788 | 23636.5 |
| cytochrome c-type biogenesis thiol:disulfide oxidoreductase ccmh | DNQ41_RS16135 | Not Available | Negative | 3141824 - 3142876 | 39091.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





