Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein dd-endopeptidase mepm | DNQ41_RS13675 | Not Available | Negative | 2676433 - 2677755 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | DNQ41_RS13680 | Not Available | Negative | 2677771 - 2678703 | 33779.2 |
| zinc abc transporter atp-binding protein znuc | DNQ41_RS13685 | Not Available | Positive | 2678782 - 2679537 | 27869.3 |
| zinc abc transporter permease subunit znub | DNQ41_RS13690 | Not Available | Positive | 2679534 - 2680319 | 27686.4 |
| holliday junction branch migration dna helicase ruvb | DNQ41_RS13695 | Not Available | Negative | 2680466 - 2681476 | 37176.0 |
| holliday junction branch migration protein ruva | DNQ41_RS13700 | Not Available | Negative | 2681485 - 2682096 | 22117.0 |
| stress response small protein yobi | DNQ41_RS13705 | Not Available | Negative | 2682235 - 2682300 | 2665.42 |
| yebb family permuted papain-like enzyme | DNQ41_RS13710 | Not Available | Positive | 2682371 - 2682973 | 22705.2 |
| crossover junction endodeoxyribonuclease ruvc | DNQ41_RS13715 | Not Available | Negative | 2682975 - 2683496 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | DNQ41_RS13720 | Not Available | Negative | 2683531 - 2684271 | 26424.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





