Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator nimr | DNQ41_RS13310 | Not Available | Negative | 2610882 - 2611703 | 30555.4 |
| 2-nitroimidazole transporter | DNQ41_RS13315 | Not Available | Positive | 2611800 - 2612981 | 41210.8 |
| duf488 domain-containing protein | DNQ41_RS13320 | Not Available | Positive | 2613036 - 2613383 | 13386.9 |
| duf333 domain-containing lipoprotein yoaf | DNQ41_RS13325 | Not Available | Negative | 2613405 - 2613659 | 8942.87 |
| diguanylate cyclase dgcp | DNQ41_RS13330 | Not Available | Positive | 2613842 - 2614867 | 38547.8 |
| yoak family small membrane protein | DNQ41_RS13335 | Not Available | Positive | 2614900 - 2614998 | 3458.45 |
| protein yoaj | DNQ41_RS13340 | Not Available | Positive | 2615001 - 2615075 | 2691.57 |
| glsb/yeaq/ymge family stress response membrane protein | DNQ41_RS13345 | Not Available | Negative | 2615134 - 2615382 | 8671.14 |
| duf1869 domain-containing protein | DNQ41_RS13350 | Not Available | Negative | 2615530 - 2615712 | 6608.63 |
| carbohydrate-specific porin bglh | DNQ41_RS13355 | Not Available | Negative | 2615716 - 2616074 | 13178.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





