Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 family protein ydgh | DNQ41_RS12310 | Not Available | Positive | 2414482 - 2415426 | 33874.9 |
| amino acid permease | DNQ41_RS12320 | Not Available | Positive | 2415612 - 2416994 | 49504.5 |
| dihydromonapterin reductase | DNQ41_RS12325 | Not Available | Positive | 2417031 - 2417753 | 26349.8 |
| glpm family protein | DNQ41_RS12330 | Not Available | Negative | 2417750 - 2418085 | 12323.8 |
| two-component system response regulator rsta | DNQ41_RS12335 | Not Available | Positive | 2418214 - 2418933 | 26705.4 |
| two-component system sensor histidine kinase rstb | DNQ41_RS12340 | Not Available | Positive | 2418937 - 2420238 | 49285.8 |
| dna replication terminus site-binding protein | DNQ41_RS12345 | Not Available | Positive | 2420314 - 2421243 | 35785.2 |
| class ii fumarate hydratase | DNQ41_RS12350 | Not Available | Negative | 2421240 - 2422643 | 50491.9 |
| class i fumarate hydratase | DNQ41_RS12355 | Not Available | Negative | 2422786 - 2424432 | 60302.0 |
| mannose-6-phosphate isomerase | DNQ41_RS12360 | Not Available | Positive | 2424631 - 2425806 | 42852.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





