Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DNQ41_RS12250 | Not Available | Negative | 2404754 - 2405647 | 33283.4 |
| mfs transporter | DNQ41_RS12255 | Not Available | Positive | 2405754 - 2407007 | 45260.2 |
| acid resistance repetitive basic protein asr | DNQ41_RS12265 | Not Available | Positive | 2407431 - 2407739 | 10591.8 |
| hypothetical protein | DNQ41_RS12270 | Not Available | Positive | 2407832 - 2407915 | 3206.2 |
| trypsin-like serine peptidase | DNQ41_RS12275 | Not Available | Positive | 2408015 - 2408836 | 29278.6 |
| multidrug/spermidine efflux smr transporter subunit mdti | DNQ41_RS12280 | Not Available | Negative | 2408875 - 2409204 | 11720.8 |
| multidrug/spermidine efflux smr transporter subunit mdtj | DNQ41_RS12285 | Not Available | Negative | 2409191 - 2409556 | 13115.7 |
| ai-2 transporter tqsa | DNQ41_RS12295 | Not Available | Positive | 2409968 - 2411002 | 37545.3 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | DNQ41_RS12300 | Not Available | Negative | 2411027 - 2412415 | 48726.0 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | DNQ41_RS12305 | Not Available | Negative | 2412426 - 2413958 | 54626.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





