Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | DNQ41_RS12145 | Not Available | Positive | 2384041 - 2384787 | 27250.5 |
| dna-binding transcriptional regulator rspr | DNQ41_RS12150 | Not Available | Positive | 2384876 - 2385562 | 26566.7 |
| putative selenium delivery protein ydfz | DNQ41_RS12155 | Not Available | Positive | 2385739 - 2385942 | 7276.83 |
| mannitol dehydrogenase family protein | DNQ41_RS12160 | Not Available | Negative | 2385977 - 2387437 | 53731.3 |
| mhs family mfs transporter ydfj | DNQ41_RS12165 | Not Available | Negative | 2387526 - 2388893 | 49370.7 |
| zn-dependent oxidoreductase | DNQ41_RS12170 | Not Available | Negative | 2388951 - 2389970 | 36566.2 |
| starvation-sensing protein rspa | DNQ41_RS12175 | Not Available | Negative | 2389982 - 2391196 | 45971.0 |
| ynfa family protein | DNQ41_RS12185 | Not Available | Negative | 2391402 - 2391728 | 11920.2 |
| duf1283 family protein | DNQ41_RS12190 | Not Available | Positive | 2391863 - 2392204 | 12909.3 |
| spermidine n1-acetyltransferase | DNQ41_RS12195 | Not Available | Positive | 2392239 - 2392799 | 21888.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





