Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transporter zntb | DNQ41_RS11225 | Not Available | Positive | 2184669 - 2185652 | 36614.3 |
| protein ynal | DNQ41_RS28460 | Not Available | Positive | 2185927 - 2186100 | 6427.87 |
| atp-dependent rna helicase dbpa | DNQ41_RS11235 | Not Available | Positive | 2186130 - 2187503 | 49190.7 |
| trna 2-thiocytidine(32) synthetase ttca | DNQ41_RS11240 | Not Available | Negative | 2187632 - 2188567 | 35507.9 |
| universal stress protein uspf | DNQ41_RS11245 | Not Available | Negative | 2188744 - 2189178 | 16017.4 |
| porin ompn | DNQ41_RS11250 | Not Available | Negative | 2189319 - 2190452 | 41222.0 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DNQ41_RS11260 | Not Available | Negative | 2190819 - 2194343 | 128862.0 |
| duf333 domain-containing protein | DNQ41_RS11265 | Not Available | Positive | 2194617 - 2194883 | 8696.44 |
| heat shock protein hslj | DNQ41_RS11270 | Not Available | Negative | 2194880 - 2195302 | 15166.5 |
| d-lactate dehydrogenase | DNQ41_RS11275 | Not Available | Negative | 2195413 - 2196402 | 36536.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





