Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycik family oxidoreductase | DNQ41_RS10805 | Not Available | Negative | 2105397 - 2106155 | 27934.6 |
| protease sohb | DNQ41_RS10810 | Not Available | Positive | 2106375 - 2107424 | 39368.7 |
| ycin family protein | DNQ41_RS10815 | Not Available | Negative | 2107460 - 2107711 | 9386.17 |
| type i dna topoisomerase | DNQ41_RS10825 | Not Available | Positive | 2108091 - 2110688 | 97355.0 |
| hth-type transcriptional regulator cysb | DNQ41_RS10835 | Not Available | Positive | 2110898 - 2111872 | 36152.5 |
| is1-like element is1a family transposase | DNQ41_RS10845 | Not Available | Positive | 2112162 - 2112859 | 26536.4 |
| ymia family putative membrane protein | DNQ41_RS10850 | Not Available | Positive | 2112967 - 2113107 | 5337.71 |
| protein ycix | DNQ41_RS10855 | Not Available | Positive | 2113110 - 2113277 | 6338.19 |
| small membrane protein ymic | DNQ41_RS27605 | Not Available | Positive | 2113391 - 2113486 | 3822.77 |
| aconitate hydratase acna | DNQ41_RS10865 | Not Available | Positive | 2113649 - 2116324 | 97668.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





