Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase nfsa | DNQ41_RS08280 | Not Available | Positive | 1636176 - 1636889 | 26369.7 |
| 30s ribosomal protein s6--l-glutamate ligase | DNQ41_RS08285 | Not Available | Positive | 1636950 - 1637852 | 32438.5 |
| ybjn domain-containing protein | DNQ41_RS08290 | Not Available | Positive | 1637940 - 1638416 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | DNQ41_RS08300 | Not Available | Positive | 1638767 - 1639879 | 40841.7 |
| putrescine abc transporter atp-binding subunit potg | DNQ41_RS08305 | Not Available | Positive | 1639974 - 1641107 | 41933.3 |
| putrescine abc transporter permease poth | DNQ41_RS08310 | Not Available | Positive | 1641117 - 1642070 | 35491.6 |
| putrescine abc transporter permease poti | DNQ41_RS08315 | Not Available | Positive | 1642067 - 1642912 | 30542.4 |
| ybjo family protein | DNQ41_RS08320 | Not Available | Positive | 1642972 - 1643460 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | DNQ41_RS08325 | Not Available | Positive | 1643501 - 1644628 | 41958.1 |
| carbohydrate-specific porin bglh | DNQ41_RS28450 | Not Available | Positive | 1644679 - 1644777 | 3301.04 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





