Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DNQ41_RS07970 | Not Available | Negative | 1571122 - 1572255 | 42062.4 |
| atp-binding cassette domain-containing protein | DNQ41_RS07975 | Not Available | Negative | 1572248 - 1573984 | 63064.2 |
| secretion protein hlyd | DNQ41_RS07980 | Not Available | Negative | 1573977 - 1574972 | 36287.7 |
| dna-binding transcriptional regulator cecr | DNQ41_RS07985 | Not Available | Negative | 1574975 - 1575646 | 25018.1 |
| atp-dependent rna helicase rhle | DNQ41_RS07990 | Not Available | Positive | 1575875 - 1577239 | 49992.4 |
| n-glycosidase ybia | DNQ41_RS07995 | Not Available | Negative | 1577471 - 1577953 | 18670.3 |
| atp-dependent dna helicase ding | DNQ41_RS08005 | Not Available | Positive | 1578073 - 1580223 | 81444.9 |
| dna-binding protein ybib | DNQ41_RS08010 | Not Available | Positive | 1580251 - 1581213 | 35050.7 |
| hydroxycarboxylate dehydrogenase hcxb | DNQ41_RS08015 | Not Available | Positive | 1581354 - 1582439 | 38899.3 |
| protein ybie | DNQ41_RS28040 | Not Available | Positive | 1582506 - 1582565 | 2006.37 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





