Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DNQ41_RS07150 | Not Available | Negative | 1414591 - 1415058 | 17342.1 |
| ribosome silencing factor | DNQ41_RS07155 | Not Available | Negative | 1415062 - 1415379 | 11582.9 |
| adenosylcobalamin/alpha-ribazole phosphatase | DNQ41_RS07160 | Not Available | Negative | 1415639 - 1416250 | 23291.8 |
| nicotinate-nucleotide adenylyltransferase | DNQ41_RS07165 | Not Available | Negative | 1416274 - 1416915 | 24529.3 |
| dna polymerase iii subunit delta | DNQ41_RS07170 | Not Available | Negative | 1416917 - 1417948 | 38706.0 |
| lps assembly lipoprotein lpte | DNQ41_RS07175 | Not Available | Negative | 1417948 - 1418529 | 21357.8 |
| leucine--trna ligase | DNQ41_RS07180 | Not Available | Negative | 1418544 - 1421126 | 97239.0 |
| zinc ribbon-containing protein | DNQ41_RS07185 | Not Available | Positive | 1421361 - 1421843 | 18798.2 |
| sel1 family tpr-like repeat protein ybeq | DNQ41_RS07190 | Not Available | Negative | 1421913 - 1422890 | 37032.7 |
| duf1266 domain-containing protein | DNQ41_RS07195 | Not Available | Positive | 1423054 - 1423761 | 27737.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





