Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit alpha | DNQ41_RS07035 | Not Available | Negative | 1394382 - 1395914 | 55194.0 |
| citrate (pro-3s)-lyase subunit beta | DNQ41_RS07040 | Not Available | Negative | 1395925 - 1396833 | 33111.6 |
| citrate lyase acyl carrier protein | DNQ41_RS07045 | Not Available | Negative | 1396830 - 1397126 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | DNQ41_RS07050 | Not Available | Negative | 1397141 - 1398199 | 40079.5 |
| sensor histidine kinase dpib | DNQ41_RS07055 | Not Available | Positive | 1398578 - 1400236 | 61687.8 |
| two-component response regulator dpia | DNQ41_RS07060 | Not Available | Positive | 1400205 - 1400885 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | DNQ41_RS07065 | Not Available | Negative | 1400926 - 1402311 | 48415.3 |
| lipid iv(a) palmitoyltransferase pagp | DNQ41_RS07075 | Not Available | Positive | 1402900 - 1403460 | 21770.6 |
| transcription antiterminator/rna stability regulator cspe | DNQ41_RS07080 | Not Available | Positive | 1403635 - 1403844 | 7463.84 |
| fluoride efflux transporter crcb | DNQ41_RS07085 | Not Available | Negative | 1403898 - 1404281 | 13778.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





