Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | DNQ41_RS06585 | Not Available | Negative | 1305389 - 1305910 | 19559.6 |
| ribosome-associated protein ybcj | DNQ41_RS06590 | Not Available | Negative | 1306018 - 1306230 | 7389.95 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DNQ41_RS06595 | Not Available | Negative | 1306232 - 1307098 | 31045.6 |
| type 1 fimbrial major subunit fima | DNQ41_RS06600 | Not Available | Positive | 1307569 - 1308111 | 18475.5 |
| type 1 fimbria chaperone fimc | DNQ41_RS06605 | Not Available | Positive | 1308331 - 1309023 | 25459.1 |
| carbohydrate-specific porin bglh | DNQ41_RS06610 | Not Available | Positive | 1309054 - 1311656 | 96144.6 |
| type 1 fimbria d-mannose specific adhesin fimh | DNQ41_RS06615 | Not Available | Positive | 1311698 - 1312675 | 35495.4 |
| fimbria assembly protein | DNQ41_RS06620 | Not Available | Positive | 1312686 - 1313201 | 18223.6 |
| fimbria biosynthesis transcriptional regulator fimz | DNQ41_RS06625 | Not Available | Negative | 1313204 - 1313836 | 23664.9 |
| Trna-arg | Not Available | Not Available | Positive | 1314079 - 1314155 | Not Available |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





