Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein ybba | DNQ41_RS06430 | Not Available | Positive | 1269092 - 1269778 | 24534.5 |
| putative abc transporter permease subunit ybbp | DNQ41_RS06435 | Not Available | Positive | 1269775 - 1272189 | 89284.4 |
| carbohydrate-specific porin bglh | DNQ41_RS06440 | Not Available | Positive | 1272620 - 1276900 | 159605.0 |
| ybbc/yhhh family protein | DNQ41_RS06445 | Not Available | Positive | 1276940 - 1277308 | 14153.2 |
| carbohydrate-specific porin bglh | DNQ41_RS06450 | Not Available | Positive | 1277311 - 1278018 | 26829.4 |
| hypothetical protein | DNQ41_RS06455 | Not Available | Positive | 1277999 - 1278259 | 10052.4 |
| carbohydrate-specific porin bglh | DNQ41_RS06460 | Not Available | Negative | 1279009 - 1279374 | 13753.4 |
| trna 2-selenouridine(34) synthase mnmh | DNQ41_RS06465 | Not Available | Negative | 1279490 - 1280584 | 41113.2 |
| hth-type transcriptional activator alls | DNQ41_RS06470 | Not Available | Negative | 1280653 - 1281579 | 34513.6 |
| ureidoglycolate lyase | DNQ41_RS06475 | Not Available | Positive | 1281809 - 1282291 | 18223.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





