Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | DNQ41_RS06105 | Not Available | Positive | 1204595 - 1205893 | 48195.4 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DNQ41_RS06110 | Not Available | Positive | 1206139 - 1206762 | 23188.1 |
| atp-dependent protease atp-binding subunit clpx | DNQ41_RS06115 | Not Available | Positive | 1206888 - 1208162 | 46358.7 |
| endopeptidase la | DNQ41_RS06120 | Not Available | Positive | 1208350 - 1210704 | 87443.4 |
| nucleoid-associated protein hu-beta | DNQ41_RS06125 | Not Available | Positive | 1210895 - 1211185 | 10050.2 |
| peptidylprolyl isomerase | DNQ41_RS06130 | Not Available | Positive | 1211377 - 1213248 | 68153.7 |
| helix-hairpin-helix domain-containing protein | DNQ41_RS06135 | Not Available | Positive | 1213399 - 1213770 | 12704.4 |
| long-chain acyl-coa thioesterase fadm | DNQ41_RS06140 | Not Available | Positive | 1213864 - 1214262 | 15089.2 |
| 7-cyano-7-deazaguanine synthase quec | DNQ41_RS06145 | Not Available | Negative | 1214314 - 1215009 | 25515.6 |
| sgrr family transcriptional regulator | DNQ41_RS06150 | Not Available | Negative | 1215074 - 1216774 | 64995.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





