Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-sedoheptulose 7-phosphate isomerase | DNQ41_RS05030 | Not Available | Positive | 1009166 - 1009744 | 20816.0 |
| class ii glutamine amidotransferase | DNQ41_RS05035 | Not Available | Positive | 1009950 - 1010717 | 28637.2 |
| peptidoglycan meso-diaminopimelic acid protein amidase | DNQ41_RS05040 | Not Available | Negative | 1010688 - 1011428 | 28022.8 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | DNQ41_RS05045 | Not Available | Negative | 1011584 - 1011862 | 10847.2 |
| type ii toxin-antitoxin system antitoxin dinj | DNQ41_RS05050 | Not Available | Negative | 1011865 - 1012125 | 9406.33 |
| c40 family peptidase | DNQ41_RS05055 | Not Available | Positive | 1012335 - 1013084 | 28786.4 |
| rep-associated tyrosine transposase rayt | DNQ41_RS05060 | Not Available | Positive | 1013260 - 1013757 | 20042.8 |
| carbohydrate-specific porin bglh | DNQ41_RS05065 | Not Available | Negative | 1013981 - 1015693 | 62139.7 |
| putative lateral flagellar export/assembly protein lafu | DNQ41_RS05070 | Not Available | Positive | 1015665 - 1016450 | 28956.0 |
| dna polymerase iv | DNQ41_RS05075 | Not Available | Positive | 1016521 - 1017576 | 39518.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





