Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | DNQ41_RS04875 | Not Available | Positive | 971680 - 972411 | 27100.5 |
| Trna-asp | Not Available | Not Available | Positive | 972544 - 972620 | Not Available |
| lipoprotein | DNQ41_RS04890 | Not Available | Positive | 972948 - 973733 | 29607.2 |
| protein ykfm | DNQ41_RS04895 | Not Available | Negative | 973870 - 974349 | 18136.9 |
| hypothetical protein | DNQ41_RS04900 | Not Available | Negative | 974359 - 975273 | 33943.4 |
| hcp family type vi secretion system effector | DNQ41_RS04905 | Not Available | Negative | 975317 - 975799 | 18000.5 |
| carbohydrate-specific porin bglh | DNQ41_RS04910 | Not Available | Negative | 975726 - 977175 | 54287.8 |
| type vi secretion system membrane subunit tssm | DNQ41_RS04915 | Not Available | Negative | 977186 - 980620 | 130921.0 |
| type vi secretion system protein tssa | DNQ41_RS04920 | Not Available | Negative | 980729 - 982141 | 52378.1 |
| type vi secretion system-associated protein vasi | DNQ41_RS04925 | Not Available | Negative | 982146 - 982889 | 26444.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





