Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 51008369SK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 51008369SK1 plasmid p51008369SK1_C,
Gene Summary
Adenine Count
9427 bp
Thymine Count
10322 bp
Guanine Count
6411 bp
Cytosine Count
7666 bp
Genome Length
33826 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase ldcc | DNQ41_RS04725 | Not Available | Positive | 945292 - 947433 | 80594.9 |
| voc family protein | DNQ41_RS04730 | Not Available | Positive | 947490 - 947879 | 14737.4 |
| carbohydrate-specific porin bglh | DNQ41_RS04735 | Not Available | Positive | 947944 - 949241 | 48419.7 |
| rho-binding antiterminator | DNQ41_RS04740 | Not Available | Negative | 949290 - 949550 | 9698.45 |
| yaep family protein | DNQ41_RS04745 | Not Available | Negative | 949537 - 949737 | 7214.59 |
| yaeq family protein | DNQ41_RS04750 | Not Available | Positive | 949903 - 950448 | 20877.7 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | DNQ41_RS04755 | Not Available | Positive | 950445 - 950867 | 15624.0 |
| envelope stress response activation lipoprotein nlpe | DNQ41_RS04760 | Not Available | Positive | 950881 - 951591 | 25845.7 |
| yaef family permuted papain-like enzyme | DNQ41_RS04765 | Not Available | Negative | 951791 - 952615 | 29913.9 |
| proline--trna ligase | DNQ41_RS04770 | Not Available | Negative | 952669 - 954387 | 63626.2 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





