Escherichia coli str. 204965

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 204965 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological temperature of its common host environments. E. coli strain 204965 is categorized as a facultative anaerobe, indicating its ability to adapt to both aerobic and anaerobic conditions, thereby enhancing its survival in varied habitats. The strain is host-associated, suggesting a close relationship with its biological hosts, which may include a variety of animals and potentially humans. This association typically involves inhabiting the intestinal tract, where E. coli plays a crucial role in the microbiome, contributing to nutrient absorption and digestion. However, the specific ecological role of strain 204965 within its host environment remains to be clearly defined. Given its traits, Escherichia coli strain 204965 likely exhibits a versatile metabolic capacity that enables it to thrive in diverse environments, adapting to different oxygen levels and temperatures. This adaptability underscores the significance of such strains in ecological contexts, where they can contribute to maintaining microbial diversity and stability within their host-associated ecosystems. Further research may illuminate the specific interactions and functions of this strain in its natural habitat, offering insights into the broader implications of E. coli in microbiological studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain204965

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 204965
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 204965 NODE_448_length_143_cov_62.048950,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

711 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-(glutamine-n5) methyltransferase, release factor-specificBUE81_19130Not AvailableNegative3584284 - 358511730976.8
peptide chain release factor 1BUE81_19135Not AvailableNegative3585117 - 358619940519.6
glutamyl-trna reductaseBUE81_19140Not AvailableNegative3586241 - 358749746309.5
lipoprotein localization factor lolbBUE81_19145Not AvailablePositive3587711 - 358833423552.1
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseBUE81_19150Not AvailablePositive3588334 - 358918530927.1
ribose-phosphate pyrophosphokinaseBUE81_19155Not AvailablePositive3589336 - 359028334220.3
c4-dicarboxylic acid transporter dauaBUE81_19160Not AvailablePositive3590408 - 359208759432.8
hypothetical proteinBUE81_19165Not AvailableNegative3592142 - 359242010486.9
aminoacyl-trna hydrolaseBUE81_19170Not AvailablePositive3592698 - 359328221083.5
redox-regulated atpase ychfBUE81_19175Not AvailablePositive3593399 - 359449039669.6

Displaying genes 3801 – 3810 of 5560 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total