Sinorhizobium fredii NGR234

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii NGR234 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and motility, facilitated by the presence of flagella. This mesophilic microbe thrives in host-associated habitats, indicating a symbiotic relationship with its plant partners. Notably, S. fredii NGR234 possesses a complex genome comprising three replicons, as evidenced by its genome accessions NC_012587.1, NC_000914.2, and NC_012586.1. The unique combination of these traits positions Sinorhizobium fredii NGR234 as a significant player in nitrogen fixation, contributing to soil fertility and plant health. The bacterium's motility and aerobic nature suggest adaptation to dynamic environmental conditions within the host ecosystem. Understanding the genetic and phenotypic characteristics of S. fredii NGR234 can provide insights into its role in agricultural systems and its potential influence on plant growth and soil microbiome interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
StrainNGR234

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii NGR234
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Lablab purpureus, Parasponia andersonii, Leucaena leucocephala
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii NGR234, complete sequence.

Gene Summary

Adenine Count

725692 bp

Thymine Count

725686 bp

Guanine Count

1233534 bp

Cytosine Count

1240790 bp

Genome Length

3925702 bp

Protein-coding Genes

3625 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trimethylamine methyltransferase family proteinNGR_RS11295Not AvailableNegative2415780 - 241732456212.9
lysr substrate-binding domain-containing proteinNGR_RS11300Not AvailablePositive2417415 - 241835034377.1
laci family dna-binding transcriptional regulatorNGR_RS11305Not AvailablePositive2418476 - 241947737159.8
sterol desaturase family proteinNGR_RS11310Not AvailablePositive2419653 - 242068739952.0
moce family 2fe-2s type ferredoxinNGR_RS11315Not AvailablePositive2420684 - 242099511408.5
substrate-binding domain-containing proteinNGR_RS11320Not AvailablePositive2421072 - 242201632786.8
nad(p)/fad-dependent oxidoreductaseNGR_RS11325Not AvailablePositive2422076 - 242328141571.0
sugar phosphate isomerase/epimeraseNGR_RS11330Not AvailablePositive2423278 - 242411732499.9
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseNGR_RS11335Not AvailablePositive2424179 - 242528839137.0
voc family proteinNGR_RS11340Not AvailablePositive2425626 - 242609917104.1

Displaying genes 6011 – 6020 of 6549 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.