Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853205 bp
Thymine Count
848417 bp
Guanine Count
1522197 bp
Cytosine Count
1543091 bp
Genome Length
4767797 bp
Protein-coding Genes
4539 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase | CTR54_01880 | Not Available | Negative | 364188 - 365369 | 43651.9 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | CTR54_01885 | Not Available | Negative | 365377 - 366021 | 23059.1 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | CTR54_01890 | Not Available | Negative | 366033 - 366449 | 14916.8 |
| ribonuclease ph | CTR54_01895 | Not Available | Negative | 366477 - 367193 | 26072.3 |
| heat-inducible transcriptional repressor hrca | CTR54_01900 | Not Available | Positive | 367366 - 368454 | 39507.6 |
| nucleotide exchange factor grpe | CTR54_01905 | Not Available | Positive | 368554 - 369174 | 22016.8 |
| pts iia-like nitrogen-regulatory protein ptsn | CTR54_01910 | Not Available | Negative | 369247 - 369711 | 16600.1 |
| ribosomal subunit interface protein | CTR54_01915 | Not Available | Negative | 369783 - 370367 | 21333.1 |
| rna polymerase sigma-54 factor | CTR54_01920 | Not Available | Negative | 370599 - 372167 | 57285.8 |
| lps export abc transporter atp-binding protein | CTR54_01925 | Not Available | Negative | 372320 - 373108 | 28770.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
