Rhizobium sp.

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. is a Gram-negative, nonsporulating bacterium that thrives in aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe is commonly found in the rhizosphere, particularly in Borj Cedria soil, where it plays a crucial role in soil health and plant growth. Rhizobium species are well-known for their symbiotic relationships with leguminous plants, facilitating nitrogen fixation that enhances soil nitrogen availability, thereby promoting plant development. The presence of Rhizobium sp. in the rhizosphere underscores its importance in agricultural ecosystems, as it contributes to the sustainability of crop production through the enhancement of nitrogen content in the soil. This characteristic is particularly vital in natural and managed ecosystems, where nitrogen limitation can hinder plant growth. The ability of Rhizobium sp. to adapt to specific soil environments, such as those found in Borj Cedria, illustrates its potential for application in sustainable agricultural practices, particularly in areas where nitrogen fertilizers are not feasible or environmentally desirable. Thus, Rhizobium sp. serves as a model organism for studying plant-microbe interactions and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature28
Temperature rangeNot Available
HabitatBorj cedria soil; rhizosphere
Biotic relationshipNot Available
Host(s)Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rhizobium sp. isolate EaCA-2 46000, whole genome shotgun

Gene Summary

Adenine Count

853205 bp

Thymine Count

848417 bp

Guanine Count

1522197 bp

Cytosine Count

1543091 bp

Genome Length

4767797 bp

Protein-coding Genes

4539 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrogenase maturation proteinCTR54_17060Not AvailablePositive3478764 - 348045562385.2
sigma-54-dependent fis family transcriptional regulatorCTR54_17065Not AvailablePositive3480452 - 348190653944.1
pas domain-containing sensor histidine kinaseCTR54_17070Not AvailablePositive3481890 - 348325750033.8
hypothetical proteinCTR54_17075Not AvailablePositive3483630 - 348390510532.5
hypothetical proteinCTR54_17080Not AvailablePositive3484015 - 34842789658.25
glycosyl transferase family 1CTR54_17085Not AvailablePositive3484409 - 348668883697.6
glycosidaseCTR54_17090Not AvailablePositive3486734 - 348804748570.7
n-acylglucosamine 2-epimeraseCTR54_17095Not AvailablePositive3488091 - 348928744225.4
iclr family transcriptional regulatorCTR54_17100Not AvailableNegative3489284 - 349007228745.7
acyl-coa hydrataseCTR54_17105Not AvailableNegative3490159 - 349173957078.3

Displaying genes 3391 – 3400 of 4602 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0039872Azotobacter vinelandiiNot availableNot availableNot available
BASm0040237Aspergillus oryzae RIB40Not availableNot availableNot available

Displaying 1–2 of 2 metabolites

Health Effects

Health ConditionRelationReference
Crown gallCausesPMC12602688
TumorsCausesPMC12602688
Hairy root diseasesCausesPMC12602688

Displaying health effects 1 – 3 of 3 in total