Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853205 bp
Thymine Count
848417 bp
Guanine Count
1522197 bp
Cytosine Count
1543091 bp
Genome Length
4767797 bp
Protein-coding Genes
4539 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipyl-coa thiolase | CTR54_15895 | Not Available | Negative | 3243446 - 3244651 | 41666.1 |
| 3-oxoacid coa-transferase | CTR54_15900 | Not Available | Negative | 3244656 - 3245351 | 24748.8 |
| 3-oxoadipate coa-transferase | CTR54_15905 | Not Available | Negative | 3245348 - 3246055 | 24752.8 |
| iclr family transcriptional regulator | CTR54_15910 | Not Available | Positive | 3246227 - 3246964 | 26245.2 |
| protocatechuate 3,4-dioxygenase subunit alpha | CTR54_15915 | Not Available | Negative | 3247090 - 3247707 | 22577.7 |
| protocatechuate 3,4-dioxygenase subunit beta | CTR54_15920 | Not Available | Negative | 3247709 - 3248449 | 28037.5 |
| 4-carboxymuconolactone decarboxylase | CTR54_15925 | Not Available | Negative | 3248446 - 3248862 | 15321.0 |
| 3-oxoadipate enol-lactonase | CTR54_15930 | Not Available | Negative | 3248864 - 3249652 | 28216.8 |
| pca operon transcription factor pcaq | CTR54_15935 | Not Available | Positive | 3249742 - 3250668 | 33312.5 |
| dna polymerase i | CTR54_15940 | Not Available | Negative | 3250677 - 3253676 | 108648.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
