Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853205 bp
Thymine Count
848417 bp
Guanine Count
1522197 bp
Cytosine Count
1543091 bp
Genome Length
4767797 bp
Protein-coding Genes
4539 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial assembly protein fima | CTR54_13940 | Not Available | Negative | 2815904 - 2816578 | 23250.8 |
| enamine deaminase rida | CTR54_13945 | Not Available | Negative | 2816586 - 2817002 | 15420.8 |
| fad-dependent oxidoreductase | CTR54_13950 | Not Available | Positive | 2817424 - 2818650 | 44168.2 |
| 4-hydroxyphenylacetate 3-hydroxylase | CTR54_13955 | Not Available | Negative | 2818798 - 2820321 | 56625.9 |
| acetylornithine deacetylase | CTR54_13960 | Not Available | Negative | 2820453 - 2821607 | 40164.2 |
| hypothetical protein | CTR54_13965 | Not Available | Negative | 2821620 - 2821988 | 13171.6 |
| nadh:flavin oxidoreductase | CTR54_13970 | Not Available | Negative | 2821998 - 2824109 | 77616.8 |
| aminoglycoside phosphotransferase | CTR54_13975 | Not Available | Positive | 2824347 - 2825336 | 36948.8 |
| aspartate aminotransferase family protein | CTR54_13980 | Not Available | Positive | 2825347 - 2826675 | 47251.4 |
| 3-oxoacyl-acp reductase fabg | CTR54_13985 | Not Available | Negative | 2826735 - 2827508 | 26043.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
