Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853205 bp
Thymine Count
848417 bp
Guanine Count
1522197 bp
Cytosine Count
1543091 bp
Genome Length
4767797 bp
Protein-coding Genes
4539 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c family protein | CTR54_12115 | Not Available | Negative | 2439080 - 2439466 | 13591.7 |
| glycine/betaine abc transporter substrate-binding protein | CTR54_12120 | Not Available | Positive | 2439764 - 2440720 | 33834.2 |
| choline abc transporter permease subunit | CTR54_12125 | Not Available | Positive | 2440800 - 2441675 | 31237.4 |
| choline abc transporter atp-binding protein | CTR54_12130 | Not Available | Positive | 2441672 - 2442718 | 37768.9 |
| pyridoxamine 5'-phosphate oxidase | CTR54_12135 | Not Available | Positive | 2442763 - 2443512 | 27276.8 |
| transcriptional regulator | CTR54_12140 | Not Available | Positive | 2443623 - 2443943 | 11271.8 |
| phosphatase | CTR54_12145 | Not Available | Negative | 2444310 - 2446280 | 71385.2 |
| aspartate aminotransferase family protein | CTR54_12150 | Not Available | Positive | 2446613 - 2447941 | 48224.1 |
| hypothetical protein | CTR54_12155 | Not Available | Negative | 2448773 - 2448985 | 7961.18 |
| srpbcc domain-containing protein | CTR54_12160 | Not Available | Negative | 2449154 - 2449564 | 15617.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
