Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853205 bp
Thymine Count
848417 bp
Guanine Count
1522197 bp
Cytosine Count
1543091 bp
Genome Length
4767797 bp
Protein-coding Genes
4539 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | CTR54_10800 | Not Available | Negative | 2161464 - 2162897 | 50019.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CTR54_10805 | Not Available | Negative | 2162894 - 2164354 | 50989.1 |
| cell division protein | CTR54_10810 | Not Available | Negative | 2164416 - 2166167 | 62906.7 |
| hypothetical protein | CTR54_10815 | Not Available | Negative | 2166167 - 2166541 | 14037.0 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | CTR54_10820 | Not Available | Negative | 2166545 - 2167570 | 36165.4 |
| transcriptional regulator mraz | CTR54_10825 | Not Available | Negative | 2167585 - 2168025 | 16461.7 |
| fad-dependent oxidoreductase | CTR54_10835 | Not Available | Negative | 2168926 - 2170113 | 42247.1 |
| lytic transglycosylase | CTR54_10840 | Not Available | Negative | 2170353 - 2170874 | 18534.6 |
| n-acetylmuramoyl-l-alanine amidase | CTR54_10845 | Not Available | Negative | 2171142 - 2171903 | 27868.9 |
| molecular chaperone djla | CTR54_10850 | Not Available | Negative | 2171900 - 2172637 | 27272.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
