Rhizobium sp.

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. is a Gram-negative, nonsporulating bacterium that thrives in aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe is commonly found in the rhizosphere, particularly in Borj Cedria soil, where it plays a crucial role in soil health and plant growth. Rhizobium species are well-known for their symbiotic relationships with leguminous plants, facilitating nitrogen fixation that enhances soil nitrogen availability, thereby promoting plant development. The presence of Rhizobium sp. in the rhizosphere underscores its importance in agricultural ecosystems, as it contributes to the sustainability of crop production through the enhancement of nitrogen content in the soil. This characteristic is particularly vital in natural and managed ecosystems, where nitrogen limitation can hinder plant growth. The ability of Rhizobium sp. to adapt to specific soil environments, such as those found in Borj Cedria, illustrates its potential for application in sustainable agricultural practices, particularly in areas where nitrogen fertilizers are not feasible or environmentally desirable. Thus, Rhizobium sp. serves as a model organism for studying plant-microbe interactions and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature28
Temperature rangeNot Available
HabitatBorj cedria soil; rhizosphere
Biotic relationshipNot Available
Host(s)Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rhizobium sp. isolate EaCA-2 46000, whole genome shotgun

Gene Summary

Adenine Count

853205 bp

Thymine Count

848417 bp

Guanine Count

1522197 bp

Cytosine Count

1543091 bp

Genome Length

4767797 bp

Protein-coding Genes

4539 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCTR54_07205Not AvailableNegative1415638 - 141610815798.3
atp-binding proteinCTR54_07210Not AvailablePositive1416228 - 141705229791.0
30s ribosomal protein s2CTR54_07215Not AvailablePositive1417250 - 141801728097.7
elongation factor tsCTR54_07220Not AvailablePositive1418287 - 141921332114.6
ump kinaseCTR54_07225Not AvailablePositive1419316 - 142003824900.1
ribosome recycling factorCTR54_07230Not AvailablePositive1420088 - 142064820769.1
di-trans,poly-cis-decaprenylcistransferaseCTR54_07235Not AvailablePositive1420698 - 142144127699.9
phosphatidate cytidylyltransferaseCTR54_07240Not AvailablePositive1421451 - 142228429225.2
rip metalloprotease rsepCTR54_07245Not AvailablePositive1422317 - 142345040235.2
outer membrane protein assembly factor bamaCTR54_07250Not AvailablePositive1423644 - 142600185670.9

Displaying genes 1451 – 1460 of 4602 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0039872Azotobacter vinelandiiNot availableNot availableNot available
BASm0040237Aspergillus oryzae RIB40Not availableNot availableNot available

Displaying 1–2 of 2 metabolites

Health Effects

Health ConditionRelationReference
Crown gallCausesPMC12602688
TumorsCausesPMC12602688
Hairy root diseasesCausesPMC12602688

Displaying health effects 1 – 3 of 3 in total