Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853205 bp
Thymine Count
848417 bp
Guanine Count
1522197 bp
Cytosine Count
1543091 bp
Genome Length
4767797 bp
Protein-coding Genes
4539 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CTR54_04900 | Not Available | Negative | 991847 - 992425 | 20561.1 |
| hypothetical protein | CTR54_04905 | Not Available | Positive | 992655 - 993101 | 15891.4 |
| sorbosone dehydrogenase | CTR54_04910 | Not Available | Negative | 993180 - 994475 | 46299.5 |
| xre family transcriptional regulator | CTR54_04915 | Not Available | Negative | 994548 - 994967 | 15366.4 |
| hypothetical protein | CTR54_04920 | Not Available | Negative | 994970 - 995275 | 11182.6 |
| pyrroloquinoline quinone biosynthesis protein pqqe | CTR54_04925 | Not Available | Negative | 995343 - 996458 | 39849.6 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | CTR54_04930 | Not Available | Negative | 996455 - 996796 | 11897.3 |
| pyrroloquinoline quinone biosynthesis protein c | CTR54_04935 | Not Available | Negative | 996793 - 997593 | 29906.4 |
| pyrroloquinoline quinone biosynthesis protein pqqb | CTR54_04940 | Not Available | Negative | 997556 - 998470 | 32515.9 |
| pyrroloquinoline quinone precursor peptide pqqa | CTR54_04945 | Not Available | Negative | 998496 - 998591 | 3515.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
