Rhizobium leguminosarum bv. viciae

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium leguminosarum bv. viciae is a Gram-negative, rod-shaped bacterium that exists primarily as single cells in soil environments. This microbe is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds, a trait that facilitates its role in the nutrient cycling within soil ecosystems. As an aerobic organism, R. leguminosarum bv. viciae requires oxygen for its metabolic processes, which aligns with its ecological niche in well-aerated soils. Notably, this bacterium is nonsporulating, meaning it does not form spores, which may influence its survival strategies and interactions within the soil microbiome. The absence of sporulation suggests that R. leguminosarum bv. viciae relies on other mechanisms for resilience and persistence in its habitat, potentially including rapid growth rates or symbiotic relationships with leguminous plants. In terms of ecological significance, R. leguminosarum bv. viciae is known for its role in nitrogen fixation when associated with legume roots; however, the specific details of these interactions are not provided in the current data set. Hence, while its contributions to soil fertility and plant health are well-recognized, the precise dynamics of its ecological interactions remain an area for further investigation. Overall, R. leguminosarum bv. viciae exemplifies the complexity of soil microbiota and their essential functions in terrestrial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium leguminosarum
Strainbv. viciae

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium leguminosarum bv. viciae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipSymbiotic
Host(s)Vicia faba, Vicia, Lathyrus
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhizobium leguminosarum bv. viciae strain SEF4G12 SEF4G1257, whole

Gene Summary

Adenine Count

1342364 bp

Thymine Count

1331687 bp

Guanine Count

2084382 bp

Cytosine Count

2115192 bp

Genome Length

6873689 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinE0H54_11975Not AvailablePositive2483468 - 248418425537.0
autoaggregation protein (adhering protein)E0H54_11980Not AvailablePositive2484559 - 248539229940.1
Trna-metNot AvailableNot AvailablePositive2486017 - 2486093Not Available
trna 2-thiouridine(34) synthase mnmaE0H54_11990Not AvailableNegative2486230 - 248742942998.1
hypothetical proteinE0H54_11995Not AvailablePositive2487940 - 248820310115.8
phosphoglycerate dehydrogenaseE0H54_12000Not AvailableNegative2488382 - 248997756467.6
phosphoserine transaminaseE0H54_12005Not AvailableNegative2490123 - 249130142350.6
hypothetical proteinE0H54_12010Not AvailablePositive2491276 - 24914676817.44
porin family proteinE0H54_12015Not AvailableNegative2491484 - 249232029862.7
phosphoglucosamine mutaseE0H54_12020Not AvailableNegative2492894 - 249424648780.6

Displaying genes 2331 – 2340 of 13428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

80 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001758(9Z,12Z)-octadecadienoateC18H31O2Chemical structure of (9Z,12Z)-octadecadienoateNot available
Average279.445Da
Monoisotopic279.2329538Da

Displaying 1–10 of 80 metabolites

Health Effects

No health effects information available for this bacterium.