Sinorhizobium fredii str. NXT3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii str. NXT3 is a mesophilic, aerobic bacterium characterized by its Gram-negative bacilli morphology. This strain exhibits motility, facilitated by the presence of flagella, which enhances its ability to navigate its environment. Notably, it possesses two replicons in its genome, indicating a complex genetic architecture that may contribute to its adaptability and functionality in various conditions. The complete genomic information for this strain is accessible through the accession numbers NZ_CP024307.1 and NZ_CP024308.1. The unique combination of traits exhibited by Sinorhizobium fredii str. NXT3 suggests a specialization for environments where moderate temperatures and aerobic conditions prevail. Its motility may play a crucial role in its interactions with plant hosts, particularly in the context of symbiotic relationships. This capability highlights the potential ecological significance of this strain in promoting plant growth and soil health, thereby contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
StrainNXT3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii str. NXT3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatroot nodules
Biotic relationshipNot Available
Host(s)Lablab purpureus, Parasponia andersonii, Lotus japonicus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii strain NXT3 chromosome, complete genome.

Gene Summary

Adenine Count

733844 bp

Thymine Count

737373 bp

Guanine Count

1242970 bp

Cytosine Count

1252818 bp

Genome Length

3967005 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine--trna ligase subunit betaNXT3_RS04385Not AvailablePositive920851 - 92301679157.0
arac family transcriptional regulatorNXT3_RS04390Not AvailablePositive923037 - 92396033489.9
cupin domain-containing proteinNXT3_RS04395Not AvailablePositive924037 - 92441414101.8
lyse family translocatorNXT3_RS04400Not AvailablePositive924419 - 92503020648.9
duf523 domain-containing proteinNXT3_RS04405Not AvailablePositive925055 - 92556117693.3
plant virulence effector hpe1-like domain-containing proteinNXT3_RS04410Not AvailableNegative925672 - 92615116158.3
phosphoribosylamine--glycine ligaseNXT3_RS04415Not AvailableNegative926253 - 92752444211.8
putative bifunctional diguanylate cyclase/phosphodiesteraseNXT3_RS04420Not AvailableNegative927614 - 93000488089.6
spermidine/putrescine abc transporter substrate-binding proteinNXT3_RS04425Not AvailableNegative930001 - 93104137929.4
mfs transporterNXT3_RS04430Not AvailableNegative931144 - 93233742447.8

Displaying genes 901 – 910 of 4193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.