Sinorhizobium fredii str. NXT3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii str. NXT3 is a mesophilic, aerobic bacterium characterized by its Gram-negative bacilli morphology. This strain exhibits motility, facilitated by the presence of flagella, which enhances its ability to navigate its environment. Notably, it possesses two replicons in its genome, indicating a complex genetic architecture that may contribute to its adaptability and functionality in various conditions. The complete genomic information for this strain is accessible through the accession numbers NZ_CP024307.1 and NZ_CP024308.1. The unique combination of traits exhibited by Sinorhizobium fredii str. NXT3 suggests a specialization for environments where moderate temperatures and aerobic conditions prevail. Its motility may play a crucial role in its interactions with plant hosts, particularly in the context of symbiotic relationships. This capability highlights the potential ecological significance of this strain in promoting plant growth and soil health, thereby contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
StrainNXT3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii str. NXT3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatroot nodules
Biotic relationshipNot Available
Host(s)Lablab purpureus, Parasponia andersonii, Lotus japonicus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii strain NXT3 chromosome, complete genome.

Gene Summary

Adenine Count

733844 bp

Thymine Count

737373 bp

Guanine Count

1242970 bp

Cytosine Count

1252818 bp

Genome Length

3967005 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseNXT3_RS18005Not AvailableNegative3670642 - 367141227259.8
deor/glpr family dna-binding transcription regulatorNXT3_RS18010Not AvailablePositive3671592 - 367235627632.3
glycerol-3-phosphate dehydrogenaseNXT3_RS18015Not AvailablePositive3672485 - 367400256062.8
abc transporter atp-binding proteinNXT3_RS18020Not AvailablePositive3674044 - 367511438132.9
abc transporter atp-binding proteinNXT3_RS18025Not AvailablePositive3675137 - 367620739493.4
carbohydrate abc transporter permeaseNXT3_RS18030Not AvailablePositive3676209 - 367707532329.3
carbohydrate abc transporter permeaseNXT3_RS18035Not AvailablePositive3677096 - 367792030745.0
duf2160 domain-containing proteinNXT3_RS18040Not AvailablePositive3677951 - 367823210354.9
abc transporter substrate-binding proteinNXT3_RS18045Not AvailablePositive3678313 - 368003764231.3
nucleobase:cation symporter-2 family proteinNXT3_RS18050Not AvailablePositive3680318 - 368179050821.7

Displaying genes 3561 – 3570 of 4193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.